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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809239.1_cds_XP_016495666.1_9962
CDS Infomation

[gene=LOC107814728] [db_xref=GeneID:107814728] [protein=3-hydroxyisobutyryl-CoA hydrolase-like protein 5] [protein_id=XP_016495666.1] [location=join(40816..40884,41229..41312,41558..41626,41731..41794,42013..42170,42277..42361,42544..42629,54401..54522,54766..54826,55104..55202,55382..55483,55608..55649,67098..67207,67310..67379)] [gbkey=CDS]
Sequence

ATGGCAATAATATCTGCTCTCAGTAGTAATATTTCAATGCCTAAACAAGTAGTGAAACCA
AATAGAGAGGTTATTATTACTAAGGAACTTGGTCATGCTAGAGTGCTCACCTTAAATCGG
CCTAACCATTTAAATTTTTTAGGGGAGAGAGAGGTATTAATGCTGGGGCAGAAATTTGAG
AAATACGAGAAAGATGATGAAGCTGAATTTGTAATTATCAAGGGAGCTGGTCGTACTTTC
TCTGCTGGTGGAGACTTAAAAACGTTCTATGATCGCCGAAACATAAGGGATTCTTGCCTT
GAAGGTACATATAGAATGTATTGGCTTTGCTACCACATTCATACATACAAGAAACCACAT
ATTGCTCTTGTCCATGGAATGGCAGTGGGTGGAGGTGCATCCTTGATGGTGCCAATGAAG
TTCTCTGTCGTCACTGAAAAGGCGTTTTGTTCTACTCCTGAAACAAGTCTAGGGTTTCAC
CCAGACTGTGGCTTCTCATACATGCTTTCGCGTCTTCCAGGTCGACTTGGGGAATACTTG
GGCTTAACAGGAGCAAAATTAAGGGGTAAAGAAATGGTAGCTGCTGGACTTGCCACTCAT
TTTGTTCCTTCTCAGAAACTATTCCAGCTAGAGAAACGCTTGGTGAGCATAAACAGTGGT
GAAGAAGATGCTATTAGATCAGTCATCAATGAATTTTCCACAAATATTGACATAGATGAA
AGAAGTATCTTGAAGAAGTTGTCCATAATCAACGAATGTTTTTCCAAGGATTCTGTGGAG
GAGATTGTGGAGTCACTTGAAGCTGAGGCAAGCAAAAAAGGAAATGATTGGATTATTACA
ACGCTTAAAAACCTAAAGAAAGCATCTCCAACAGGATTAAAAATAACATTGAGATCGATA
CGAGAAGGAAGGACACAGACACTGTTTGAATGCTTGAGGAGAGAATTCAGGATTACGATG
AACATACTACGAACTGTAATATCTGGTGATTTGTATGAGGGCATAAGGGCTGCCATTATT
GACAAGGATAAGTCTCCAAAGTGGAATCCTTCAACTCTTAACAACGTGCACGATGATCAG
CTCGACTTGATCTTCAAGCCATTCGAAGAAGATGACTTGGAACTTCAAATTCCAGAAGAT
GATGAATGCAGGTGGGAAGGAAATTATGAAAATTCAGGTTATTGTCGTCCATCAACAGCT
CTTGGAAGTGTTCTTGTGTAA

Peptide Sequence

PEP ID

XP_016495666.1
PEP Infomation

PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Nicotiana tabacum]
Sequence

MAIISALSSNISMPKQVVKPNREVIITKELGHARVLTLNRPNHLNFLGEREVLMLGQKFE
KYEKDDEAEFVIIKGAGRTFSAGGDLKTFYDRRNIRDSCLEGTYRMYWLCYHIHTYKKPH
IALVHGMAVGGGASLMVPMKFSVVTEKAFCSTPETSLGFHPDCGFSYMLSRLPGRLGEYL
GLTGAKLRGKEMVAAGLATHFVPSQKLFQLEKRLVSINSGEEDAIRSVINEFSTNIDIDE
RSILKKLSIINECFSKDSVEEIVESLEAEASKKGNDWIITTLKNLKKASPTGLKITLRSI
REGRTQTLFECLRREFRITMNILRTVISGDLYEGIRAAIIDKDKSPKWNPSTLNNVHDDQ
LDLIFKPFEEDDLELQIPEDDECRWEGNYENSGYCRPSTALGSVLV

Transcript Sequence

Gene sequence data has not been registered.